Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTATAAATCTGTGCAGCTGCC
..((((((((((((((((((.&)))))))).))...)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020826
GeneSymbolSYT13
Binding site3803,3826
Score0.846
Seed1
Au0.588
Energy-22.7
Binding len23
Me-4.957
Phylopstem4.3944931818181825
Phylopflank3.7550147562500005
Longest consecutive pairings8
Position of longest consecutive pairings15
Pairings in 3prime end7
Position3UTR
2D Structure