Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGCAGCCTGAGCCCGAGCCGGTCCCCGCCCCCCAGTTGCT
..(((((((.(((((((((((&))))))))))).........................))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020831
GeneSymbolMRTFA
Binding site2503,2547
Score0.923
Seed1
Au0.265
Energy-23.7
Binding len44
Me-6.2
Phylopstem2.5700681818181823
Phylopflank3.151070815
Longest consecutive pairings11
Position of longest consecutive pairings33
Pairings in 3prime end8
PositionCDS
2D Structure