Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTCGATGGCCATGATTTGCAGCTGCAC
.(((((((((((((((.(((.&)))..)))))).......))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020831
GeneSymbolMRTFA
Binding site3375,3403
Score1.0
Seed1
Au0.456
Energy-23.0
Binding len28
Me-3.793
Phylopstem1.6021604090909094
Phylopflank2.318746579
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure