Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTCTAGTGGGGCCGAGGCTGCAGA
((((((((.(((((.(((((.&)))....)).))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020832
GeneSymbolZNF687
Binding site1027,1052
Score0.923
Seed1
Au0.382
Energy-22.8
Binding len25
Me-5.729
Phylopstem1.42625575
Phylopflank1.84250463
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure