Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCTAGCGGCCCAGCTGCT
..(((((((.((((((.((((&)))).))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020836
GeneSymbolBEGAIN
Binding site443,462
Score1.0
Seed1
Au0.382
Energy-24.6
Binding len19
Me-6.2
Phylopstem1.0300301142857144
Phylopflank1.2280555925
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure