Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGAACAGCCGCGACGAGCTCTTCGACCGCAAG
((((((((((((((((.((((&))))..))))))))....))))........)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020836
GeneSymbolBEGAIN
Binding site1046,1081
Score0.846
Seed1
Au0.338
Energy-21.9
Binding len35
Me-3.938
Phylopstem1.7087178035714286
Phylopflank1.6038583499999999
Longest consecutive pairings8
Position of longest consecutive pairings21
Pairings in 3prime end7
PositionCDS
2D Structure