Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTACTATTTAAGATACTCTGATCGCACAACTGCAGA
((((((.((((((((((((((&)))))))...............)))))))...)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020839
GeneSymbolWDR48
Binding site3417,3456
Score0.846
Seed0
Au0.544
Energy-21.2
Binding len39
Me-5.481
Phylopstem0.09180506896551723
Phylopflank0.6630644900000001
Longest consecutive pairings7
Position of longest consecutive pairings32
Pairings in 3prime end8
Position3UTR
2D Structure