Details of Duplex


2D Structure dot-bracket from RNAduplex"
CATTATTACTTTTGGTACGCG&GTGATGCCAAAAGTTTCATTGG
((.....(((((((((((((.&))).)))))))))).....)).
Details
MiRNAhsa-miR-126-5p
RefseqIDNM_020843
GeneSymbolSCAPER
Binding site941,963
Score0.923
Seed0
Au0.559
Energy-16.5
Binding len22
Me-16.091
Phylopstem4.824799357142857
Phylopflank4.874793115
Longest consecutive pairings10
Position of longest consecutive pairings8
Pairings in 3prime end7
PositionCDS
2D Structure