Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TTTACAACCTCACCTGCAAT
((((((.((.(((((((((..&))))))))).)).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020843
GeneSymbolSCAPER
Binding site3078,3098
Score0.923
Seed0
Au0.603
Energy-21.3
Binding len20
Me-6.724
Phylopstem5.360162544444445
Phylopflank5.5171946387499995
Longest consecutive pairings9
Position of longest consecutive pairings11
Pairings in 3prime end6
PositionCDS
2D Structure