Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTGGGTGGATCAGCTGAGGTCAGGAGTTTG
((((((((((((((.((((((&)))))).))....))))....)))).)))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_020844
GeneSymbolTRMT9B
Binding site5100,5131
Score0.846
Seed1
Au0.441
Energy-23.2
Binding len31
Me-4.673
Phylopstem-0.02489220695652175
Phylopflank-0.32611750349999996
Longest consecutive pairings6
Position of longest consecutive pairings25
Pairings in 3prime end7
Position3UTR
2D Structure