Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CAACCACCAGACAAGCAGCTGCAGT
((((((((((..((((..(((&.)))..)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020844
GeneSymbolTRMT9B
Binding site5952,5977
Score1.0
Seed1
Au0.515
Energy-23.5
Binding len21
Me-10.109
Phylopstem-0.45959814000000004
Phylopflank-0.19876933375
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure