Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAGCCGCTGGCTGCAC
.((((((((((((((......&.))))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020845
GeneSymbolPITPNM2
Binding site1771,1789
Score0.846
Seed1
Au0.397
Energy-24.2
Binding len17
Me-4.026
Phylopstem1.6316819000000002
Phylopflank0.9770064687499999
Longest consecutive pairings7
Position of longest consecutive pairings9
Pairings in 3prime end2
PositionCDS
2D Structure