Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTGCTGACCGCCCTGGAGCTGCAT
.((((((((((((((((((..&))))).)))))).....))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020854
GeneSymbolRELCH
Binding site568,593
Score0.923
Seed1
Au0.412
Energy-24.9
Binding len25
Me-3.793
Phylopstem4.682366208333333
Phylopflank3.863899025
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure