Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCTTCAGCACCGTGCAGCTGTAC
.((((((((((((((..((((&))))...))))....)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020856
GeneSymbolTSHZ3
Binding site782,808
Score0.846
Seed1
Au0.368
Energy-21.7
Binding len26
Me-4.026
Phylopstem3.2018186111111113
Phylopflank3.1749553750000006
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure