Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAGCAGCAGCTGTG
..((((((((.(((((.....&))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020856
GeneSymbolTSHZ3
Binding site683,698
Score0.846
Seed1
Au0.338
Energy-21.3
Binding len15
Me-7.782
Phylopstem4.84619375
Phylopflank2.94257787625
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure