Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TCTTGCAGCCCGGCTGCC
..(((((((.((((((((((.&))))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020857
GeneSymbolVPS18
Binding site368,386
Score1.0
Seed1
Au0.294
Energy-27.3
Binding len18
Me-6.2
Phylopstem2.4172629999999997
Phylopflank4.3797439892500005
Longest consecutive pairings17
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure