Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGGAGAGCGCACGCTGCT
..(((((((((.((...((((&))))...)).)))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020857
GeneSymbolVPS18
Binding site1634,1655
Score0.923
Seed1
Au0.382
Energy-22.7
Binding len21
Me-9.272
Phylopstem5.2823114
Phylopflank4.759404352499999
Longest consecutive pairings5
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure