Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGAGGGAGGAGCTCCCTGGGGTTTT
((((((((.(((((((((.((&)).)))))).)))...)))))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_020859
GeneSymbolSHROOM3
Binding site919,944
Score0.846
Seed1
Au0.397
Energy-23.4
Binding len25
Me-4.994
Phylopstem4.22087717
Phylopflank2.2271902925
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure