Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CAGCCGCGGCGGCAGC
((((.((((((((((......&)))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001365848
GeneSymbolPOU2F1
Binding site50,66
Score0.846
Seed0
Au0.412
Energy-23.3
Binding len16
Me-8.29
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings6
Pairings in 3prime end2
Position5UTR
2D Structure