Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATAGACATTTTGTATGCCAGT
..((((((((((((((..((..&))..))))..)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_020869
GeneSymbolDCDC1
Binding site3368,3389
Score0.846
Seed1
Au0.662
Energy-18.0
Binding len21
Me-4.957
Phylopstem2.2463777625000003
Phylopflank1.4939051162499999
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure