Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGGTCACGACTGCAGTGGCAGG
((((.(((((((((((..(((&)))....))))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020870
GeneSymbolSH3RF1
Binding site2529,2553
Score0.923
Seed0
Au0.368
Energy-23.9
Binding len24
Me-8.057
Phylopstem1.234642618181818
Phylopflank1.34693473
Longest consecutive pairings11
Position of longest consecutive pairings6
Pairings in 3prime end6
PositionCDS
2D Structure