Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGCAGCCTCAGCA
.....((((.((((((.((((&)))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020871
GeneSymbolLRCH2
Binding site263,279
Score0.846
Seed0
Au0.235
Energy-20.6
Binding len16
Me-14.908
Phylopstem1.5964108333333336
Phylopflank1.2728335450000001
Longest consecutive pairings10
Position of longest consecutive pairings6
Pairings in 3prime end7
PositionCDS
2D Structure