Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATCTAACATGGATGTTTCTGTTGGTGAAAGCGTCATATTGCCCTGCCAGGTA
((((((((..((((((.(((..&.)))))))))...)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_020872
GeneSymbolCNTN3
Binding site1866,1918
Score1.0
Seed1
Au0.529
Energy-20.0
Binding len22
Me-6.236
Phylopstem1.5920893375
Phylopflank1.6443634597499999
Longest consecutive pairings9
Position of longest consecutive pairings12
Pairings in 3prime end5
PositionCDS
2D Structure