Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGGAGGCCCAGCTGCT
..(((((((.((((...((((&))))...))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020877
GeneSymbolDNAH2
Binding site11607,11626
Score0.923
Seed1
Au0.382
Energy-24.1
Binding len19
Me-7.168
Phylopstem2.4844684285714287
Phylopflank3.52729586375
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure