Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACAACTGCAGAGCAGC
((((..((((((((((.....&)))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020879
GeneSymbolCCDC146
Binding site2838,2854
Score0.923
Seed0
Au0.456
Energy-18.6
Binding len16
Me-9.958
Phylopstem3.033103
Phylopflank2.0741298737499996
Longest consecutive pairings10
Position of longest consecutive pairings6
Pairings in 3prime end3
PositionCDS
2D Structure