Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGCTGGATGCCGGGA
.(((((((..((..(((((...&)))))))..))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_020882
GeneSymbolCOL20A1
Binding site2895,2912
Score0.846
Seed1
Au0.397
Energy-19.6
Binding len17
Me-8.238
Phylopstem2.3539740000000005
Phylopflank2.4242575075
Longest consecutive pairings7
Position of longest consecutive pairings10
Pairings in 3prime end5
PositionCDS
2D Structure