Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGCAGCCGGCGGCTGG
...(((((((((((((.((((&))))))))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020882
GeneSymbolCOL20A1
Binding site905,924
Score0.923
Seed0
Au0.294
Energy-25.7
Binding len19
Me-6.515
Phylopstem0.23811926428571423
Phylopflank2.11134009
Longest consecutive pairings11
Position of longest consecutive pairings8
Pairings in 3prime end7
PositionCDS
2D Structure