Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGCAGCTGCAGT
(((((((((((((........&))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020882
GeneSymbolCOL20A1
Binding site7596,7610
Score0.846
Seed1
Au0.485
Energy-22.9
Binding len14
Me-5.763
Phylopstem-0.047237230769230795
Phylopflank0.03009267499999999
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure