Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGGCTGCAGCAGCTGCAGA
((((((((((.((.((..(((&))).)).)).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020883
GeneSymbolZSWIM5
Binding site1564,1585
Score0.923
Seed1
Au0.412
Energy-22.4
Binding len21
Me-7.619
Phylopstem1.8740884000000002
Phylopflank2.14537445
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure