Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAATCTGCAGCTGTGCCTAGGG
.(((((((((...(((((((((&)))))))))..)))))).))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_020886
GeneSymbolUSP28
Binding site3130,3152
Score0.923
Seed1
Au0.515
Energy-22.0
Binding len22
Me-11.254
Phylopstem1.8724305999999997
Phylopflank0.7775907162499999
Longest consecutive pairings9
Position of longest consecutive pairings13
Pairings in 3prime end8
PositionCDS
2D Structure