Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGGCGCACGCTGGGCGGTGGTGGTCCCTAAGCCGGGCCGCGGCCGGTGCAAT
(((((((((((((.....(((&.)))..))))))))...))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020890
GeneSymbolCIP2A
Binding site11,65
Score0.808
Seed1
Au0.324
Energy-21.3
Binding len23
Me-5.763
Phylopstem0.2238069125
Phylopflank0.16511163
Longest consecutive pairings8
Position of longest consecutive pairings9
Pairings in 3prime end3
Position5UTR
2D Structure