Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAATCTGCAAGTGAAAATCAAGTGCCAGGTG
(((((((((((..(((((((((&))))))))).)).........))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_020893
GeneSymbolCCDC180
Binding site3465,3496
Score0.923
Seed1
Au0.588
Energy-22.3
Binding len31
Me-8.574
Phylopstem3.1986906999999998
Phylopflank2.5231079337499995
Longest consecutive pairings9
Position of longest consecutive pairings22
Pairings in 3prime end8
PositionCDS
2D Structure