Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTATGTTGATGTCACCCAGGTG
(((((((((.((((((((....&)))))))))))....)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_020893
GeneSymbolCCDC180
Binding site3126,3148
Score0.846
Seed1
Au0.441
Energy-17.3
Binding len22
Me-5.18
Phylopstem1.778615384615385
Phylopflank2.0818499999999993
Longest consecutive pairings11
Position of longest consecutive pairings11
Pairings in 3prime end4
PositionCDS
2D Structure