Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGCTCGACCCGGAAGACAGGGCTCGTGAGCAGCGGCGGCAGCTGCAGA
((((((((((.(((((.....&.))))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020894
GeneSymbolUVSSA
Binding site2351,2401
Score1.0
Seed1
Au0.309
Energy-26.3
Binding len18
Me-6.762
Phylopstem1.81228503
Phylopflank2.8034166912500003
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure