Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTATGGTCCTGCCAGGTG
((((((((.....(((((....&)))))....)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_020897
GeneSymbolHCN3
Binding site2774,2792
Score0.846
Seed1
Au0.412
Energy-16.8
Binding len18
Me-13.697
Phylopstem1.8729995
Phylopflank0.5649969562499999
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure