Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTCAGGCAGCTGCT
..((((((((..(((.((((.&))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020897
GeneSymbolHCN3
Binding site1957,1973
Score0.923
Seed1
Au0.382
Energy-20.6
Binding len16
Me-11.362
Phylopstem2.55463225
Phylopflank2.2169378150000005
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure