Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTATAAACTTGCCGGGG
.(((((((.....(((((....&)))))....))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_020898
GeneSymbolCALCOCO1
Binding site4105,4122
Score0.923
Seed1
Au0.485
Energy-16.2
Binding len17
Me-13.553
Phylopstem3.3171951428571425
Phylopflank2.0009926850000004
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure