Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&TGGAGGAGGCTGATGGGGGCTCTG
(((((((.(((((((((((..&))).))))))))...)))).))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_020898
GeneSymbolCALCOCO1
Binding site461,485
Score0.846
Seed1
Au0.412
Energy-25.4
Binding len24
Me-6.251
Phylopstem-0.5218729833333334
Phylopflank0.09807181499999995
Longest consecutive pairings8
Position of longest consecutive pairings12
Pairings in 3prime end6
PositionCDS
2D Structure