Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGAACTACACCGCAGCCGCC
..((.((((((((.((..(((&)))..))...)))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020898
GeneSymbolCALCOCO1
Binding site1204,1226
Score0.923
Seed0
Au0.368
Energy-22.0
Binding len22
Me-9.933
Phylopstem-0.139671
Phylopflank0.21522983250000002
Longest consecutive pairings8
Position of longest consecutive pairings4
Pairings in 3prime end5
PositionCDS
2D Structure