Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTCTTATTATGACCTTGACCCAGCTGCT
..(((((((.((((..(((((&.)))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020903
GeneSymbolUSP29
Binding site1490,1519
Score1.0
Seed1
Au0.588
Energy-23.2
Binding len18
Me-7.168
Phylopstem2.1085686714285714
Phylopflank1.54188014125
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure