Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTTAACAGCCGTGGCAGTCAGAGCTCTGCCTGCAGT
((((((((((((((((.((((&)))).)))))))))))...............))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020903
GeneSymbolUSP29
Binding site392,429
Score0.923
Seed1
Au0.485
Energy-21.6
Binding len37
Me-3.938
Phylopstem0.6696647993548388
Phylopflank0.46789517174999995
Longest consecutive pairings11
Position of longest consecutive pairings21
Pairings in 3prime end7
Position5UTR
2D Structure