Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAACTGCAGCA
.....(((((((((((.....&))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020903
GeneSymbolUSP29
Binding site1354,1366
Score0.923
Seed0
Au0.471
Energy-19.8
Binding len12
Me-13.666
Phylopstem1.1858584181818181
Phylopflank1.13734401375
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure