Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TCTTGGCAACCGTAGATGTCCTACAGGGTTACCGTTGTGCTGCT
..((((((((((((((((((.&))))).))))))))........................))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020909
GeneSymbolEPB41L5
Binding site4168,4212
Score0.846
Seed1
Au0.456
Energy-20.5
Binding len44
Me-4.957
Phylopstem-0.3795372558139535
Phylopflank-0.013651953749999998
Longest consecutive pairings8
Position of longest consecutive pairings30
Pairings in 3prime end7
Position3UTR
2D Structure