Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGCAGCCGCAGCGGCC
..((.(((((((((((..(((&)))))))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020910
GeneSymbolKIAA1549
Binding site43,61
Score0.923
Seed0
Au0.162
Energy-26.0
Binding len18
Me-9.076
Phylopstem2.3142268545454545
Phylopflank2.283772743027778
Longest consecutive pairings14
Position of longest consecutive pairings4
Pairings in 3prime end6
Position5UTR
2D Structure