Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTACATTGTCTGCAACACCACATCCTCAGATGAGGTGCTAGA
..((((((((((((((((....&))))))))).........................))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_020911
GeneSymbolPLXNA4
Binding site3140,3182
Score0.846
Seed1
Au0.456
Energy-17.7
Binding len42
Me-4.957
Phylopstem0.20436524756097563
Phylopflank-0.5630521768750001
Longest consecutive pairings9
Position of longest consecutive pairings33
Pairings in 3prime end4
PositionCDS
2D Structure