Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCACGCTGAAGCGGCTGCAGA
((((((((((((.(((.((((&)))).)))))...)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020911
GeneSymbolPLXNA4
Binding site3937,3961
Score0.923
Seed1
Au0.397
Energy-22.7
Binding len24
Me-5.227
Phylopstem0.1517197266666667
Phylopflank-0.32534153125000004
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure