Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGAGCAGCTTGGGCTGCT
..((((((..((((((.((((&))))..))))))..)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001365876
GeneSymbolMYD88
Binding site1618,1639
Score0.923
Seed1
Au0.441
Energy-23.3
Binding len21
Me-7.256
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings6
Position of longest consecutive pairings9
Pairings in 3prime end7
Position3UTR
2D Structure