Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACGATGCAACCAGTGCAGCCAGCT
..((.((((((((((((..((&))..)))))))...)))))..)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020919
GeneSymbolALS2
Binding site806,830
Score0.846
Seed0
Au0.5
Energy-19.2
Binding len24
Me-9.076
Phylopstem-0.026880399999999995
Phylopflank0.35740938625000007
Longest consecutive pairings7
Position of longest consecutive pairings13
Pairings in 3prime end6
PositionCDS
2D Structure