Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCTTACAGCTGCTGATACCTGCAT
.((((((.(((((((((((((&))))))))))))).)....))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020920
GeneSymbolCHD8
Binding site2936,2961
Score1.0
Seed1
Au0.603
Energy-22.9
Binding len25
Me-6.107
Phylopstem4.116323307692308
Phylopflank3.269457487499999
Longest consecutive pairings13
Position of longest consecutive pairings12
Pairings in 3prime end8
PositionCDS
2D Structure