Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGCAGGAGAAGCTGAGGCTGCAAC
((((((((.(((((((.((((&)))))))......)))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_020921
GeneSymbolNIN
Binding site2372,2399
Score0.846
Seed1
Au0.485
Energy-20.5
Binding len27
Me-4.994
Phylopstem0.39819649999999995
Phylopflank0.07269247124999997
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure